BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B02SP1|AL428665
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig652 1686 0.0
>3x_Contig652
Length = 2532
Score = 1686 bits (850), Expect = 0.0
Identities = 858/860 (99%), Gaps = 1/860 (0%)
Strand = Plus / Minus
Query: 1 ttcacaaaacgaag-aagtwaggctccgggcaacctatgctttggaagtagctaaaaatg 59
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 ttcacaaaacgaagtaagtaaggctccgggcaacctatgctttggaagtagctaaaaatg 972
Query: 60 taagggtacaatcctctttggaatgtagtctttttcacattcgattcttcgaccaatttc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 taagggtacaatcctctttggaatgtagtctttttcacattcgattcttcgaccaatttc 912
Query: 120 ataatgagctcgtcgtctttttgccttagggcgtatgtcaatatagtgctgggcatcgat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 ataatgagctcgtcgtctttttgccttagggcgtatgtcaatatagtgctgggcatcgat 852
Query: 180 tccaatccacttggatacaataaataatttttgattttattatcgtttttcgtggtgttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tccaatccacttggatacaataaataatttttgattttattatcgtttttcgtggtgttg 792
Query: 240 aatgacgttttcatagggaaaatataattgtatattcttttcaccaatggccaattagta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 aatgacgttttcatagggaaaatataattgtatattcttttcaccaatggccaattagta 732
Query: 300 ttgaggcagtttgcgatcatgaccaagtagaattcataagagaattctggtacccatttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ttgaggcagtttgcgatcatgaccaagtagaattcataagagaattctggtacccatttt 672
Query: 360 aatttactgaattccatcaacaacttatatgccttttccgaatttattttaccgacagat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aatttactgaattccatcaacaacttatatgccttttccgaatttattttaccgacagat 612
Query: 420 atcaaaaagttcgaaatgaccaaagaaacgttcttgttatgcccatcttttgcttgtaga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 atcaaaaagttcgaaatgaccaaagaaacgttcttgttatgcccatcttttgcttgtaga 552
Query: 480 tccacaagaagcttatctaagagctttgtagctaaacttaacgatccagtttcagcaaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tccacaagaagcttatctaagagctttgtagctaaacttaacgatccagtttcagcaaaa 492
Query: 540 gctgatacgacgacagagtacacttcatattggtgttcaaccaattgcatatttttcaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gctgatacgacgacagagtacacttcatattggtgttcaaccaattgcatatttttcaga 432
Query: 600 agttctgatctaaaatcttgataaaggtcttttactgcctcatgttcgttcaacatcttg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agttctgatctaaaatcttgataaaggtcttttactgcctcatgttcgttcaacatcttg 372
Query: 660 gcgtacgagattaaagaaatgtaatagatttcattctttgaatacttcacgtttgaatca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gcgtacgagattaaagaaatgtaatagatttcattctttgaatacttcacgtttgaatca 312
Query: 720 atgaaattcttgatatagccgtactttatgtggccagggtataaattgatagccaacaaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atgaaattcttgatatagccgtactttatgtggccagggtataaattgatagccaacaaa 252
Query: 780 agattatctaaaaactcatggtcgaaggacttattcttattcaaattagaagcaaagaac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agattatctaaaaactcatggtcgaaggacttattcttattcaaattagaagcaaagaac 192
Query: 840 agatcaatggcaattttgaa 859
||||||||||||||||||||
Sbjct: 191 agatcaatggcaattttgaa 172
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7742
Number of Sequences: 1807
Number of extensions: 7742
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)